ProSHADE  0.6.1 (JUN 2018)
Protein Shape Descriptors and Symmetry Detection
proshade.ProSHADE_settings Class Reference
Inheritance diagram for proshade.ProSHADE_settings:
proshade._object

Public Member Functions

def __init__ (self)
 
def printSettings (self)
 
def getCommandLineParams (self, argc, argv)
 
def ignoreLsAddValuePy (self, val)
 
def __del__ (self)
 

Public Attributes

 this
 

Static Public Attributes

 mapResolution = _swig_property(_proshade.ProSHADE_settings_mapResolution_get, _proshade.ProSHADE_settings_mapResolution_set)
 
 bandwidth = _swig_property(_proshade.ProSHADE_settings_bandwidth_get, _proshade.ProSHADE_settings_bandwidth_set)
 
 glIntegOrder = _swig_property(_proshade.ProSHADE_settings_glIntegOrder_get, _proshade.ProSHADE_settings_glIntegOrder_set)
 
 theta = _swig_property(_proshade.ProSHADE_settings_theta_get, _proshade.ProSHADE_settings_theta_set)
 
 phi = _swig_property(_proshade.ProSHADE_settings_phi_get, _proshade.ProSHADE_settings_phi_set)
 
 mapResDefault = _swig_property(_proshade.ProSHADE_settings_mapResDefault_get, _proshade.ProSHADE_settings_mapResDefault_set)
 
 bFactorValue = _swig_property(_proshade.ProSHADE_settings_bFactorValue_get, _proshade.ProSHADE_settings_bFactorValue_set)
 
 bFactorChange = _swig_property(_proshade.ProSHADE_settings_bFactorChange_get, _proshade.ProSHADE_settings_bFactorChange_set)
 
 noIQRsFromMap = _swig_property(_proshade.ProSHADE_settings_noIQRsFromMap_get, _proshade.ProSHADE_settings_noIQRsFromMap_set)
 
 shellSpacing = _swig_property(_proshade.ProSHADE_settings_shellSpacing_get, _proshade.ProSHADE_settings_shellSpacing_set)
 
 manualShells = _swig_property(_proshade.ProSHADE_settings_manualShells_get, _proshade.ProSHADE_settings_manualShells_set)
 
 usePhase = _swig_property(_proshade.ProSHADE_settings_usePhase_get, _proshade.ProSHADE_settings_usePhase_set)
 
 useCOM = _swig_property(_proshade.ProSHADE_settings_useCOM_get, _proshade.ProSHADE_settings_useCOM_set)
 
 firstLineCOM = _swig_property(_proshade.ProSHADE_settings_firstLineCOM_get, _proshade.ProSHADE_settings_firstLineCOM_set)
 
 extraSpace = _swig_property(_proshade.ProSHADE_settings_extraSpace_get, _proshade.ProSHADE_settings_extraSpace_set)
 
 alpha = _swig_property(_proshade.ProSHADE_settings_alpha_get, _proshade.ProSHADE_settings_alpha_set)
 
 mPower = _swig_property(_proshade.ProSHADE_settings_mPower_get, _proshade.ProSHADE_settings_mPower_set)
 
 ignoreLs = _swig_property(_proshade.ProSHADE_settings_ignoreLs_get, _proshade.ProSHADE_settings_ignoreLs_set)
 
 structFiles = _swig_property(_proshade.ProSHADE_settings_structFiles_get, _proshade.ProSHADE_settings_structFiles_set)
 
 peakHeightNoIQRs = _swig_property(_proshade.ProSHADE_settings_peakHeightNoIQRs_get, _proshade.ProSHADE_settings_peakHeightNoIQRs_set)
 
 peakDistanceForReal = _swig_property(_proshade.ProSHADE_settings_peakDistanceForReal_get, _proshade.ProSHADE_settings_peakDistanceForReal_set)
 
 peakSurroundingPoints = _swig_property(_proshade.ProSHADE_settings_peakSurroundingPoints_get, _proshade.ProSHADE_settings_peakSurroundingPoints_set)
 
 aaErrorTolerance = _swig_property(_proshade.ProSHADE_settings_aaErrorTolerance_get, _proshade.ProSHADE_settings_aaErrorTolerance_set)
 
 symGapTolerance = _swig_property(_proshade.ProSHADE_settings_symGapTolerance_get, _proshade.ProSHADE_settings_symGapTolerance_set)
 
 energyLevelDist = _swig_property(_proshade.ProSHADE_settings_energyLevelDist_get, _proshade.ProSHADE_settings_energyLevelDist_set)
 
 traceSigmaDist = _swig_property(_proshade.ProSHADE_settings_traceSigmaDist_get, _proshade.ProSHADE_settings_traceSigmaDist_set)
 
 fullRotFnDist = _swig_property(_proshade.ProSHADE_settings_fullRotFnDist_get, _proshade.ProSHADE_settings_fullRotFnDist_set)
 
 enLevelsThreshold = _swig_property(_proshade.ProSHADE_settings_enLevelsThreshold_get, _proshade.ProSHADE_settings_enLevelsThreshold_set)
 
 trSigmaThreshold = _swig_property(_proshade.ProSHADE_settings_trSigmaThreshold_get, _proshade.ProSHADE_settings_trSigmaThreshold_set)
 
 taskToPerform = _swig_property(_proshade.ProSHADE_settings_taskToPerform_get, _proshade.ProSHADE_settings_taskToPerform_set)
 
 clearMapFile = _swig_property(_proshade.ProSHADE_settings_clearMapFile_get, _proshade.ProSHADE_settings_clearMapFile_set)
 
 useCubicMaps = _swig_property(_proshade.ProSHADE_settings_useCubicMaps_get, _proshade.ProSHADE_settings_useCubicMaps_set)
 
 clearMapData = _swig_property(_proshade.ProSHADE_settings_clearMapData_get, _proshade.ProSHADE_settings_clearMapData_set)
 
 mapFragBoxSize = _swig_property(_proshade.ProSHADE_settings_mapFragBoxSize_get, _proshade.ProSHADE_settings_mapFragBoxSize_set)
 
 mapFragName = _swig_property(_proshade.ProSHADE_settings_mapFragName_get, _proshade.ProSHADE_settings_mapFragName_set)
 
 mapFragBoxFraction = _swig_property(_proshade.ProSHADE_settings_mapFragBoxFraction_get, _proshade.ProSHADE_settings_mapFragBoxFraction_set)
 
 databaseName = _swig_property(_proshade.ProSHADE_settings_databaseName_get, _proshade.ProSHADE_settings_databaseName_set)
 
 volumeTolerance = _swig_property(_proshade.ProSHADE_settings_volumeTolerance_get, _proshade.ProSHADE_settings_volumeTolerance_set)
 
 symmetryFold = _swig_property(_proshade.ProSHADE_settings_symmetryFold_get, _proshade.ProSHADE_settings_symmetryFold_set)
 
 symmetryType = _swig_property(_proshade.ProSHADE_settings_symmetryType_get, _proshade.ProSHADE_settings_symmetryType_set)
 
 rotAngle = _swig_property(_proshade.ProSHADE_settings_rotAngle_get, _proshade.ProSHADE_settings_rotAngle_set)
 
 rotXAxis = _swig_property(_proshade.ProSHADE_settings_rotXAxis_get, _proshade.ProSHADE_settings_rotXAxis_set)
 
 rotYAxis = _swig_property(_proshade.ProSHADE_settings_rotYAxis_get, _proshade.ProSHADE_settings_rotYAxis_set)
 
 rotZAxis = _swig_property(_proshade.ProSHADE_settings_rotZAxis_get, _proshade.ProSHADE_settings_rotZAxis_set)
 
 rotChangeDefault = _swig_property(_proshade.ProSHADE_settings_rotChangeDefault_get, _proshade.ProSHADE_settings_rotChangeDefault_set)
 
 xTranslation = _swig_property(_proshade.ProSHADE_settings_xTranslation_get, _proshade.ProSHADE_settings_xTranslation_set)
 
 yTranslation = _swig_property(_proshade.ProSHADE_settings_yTranslation_get, _proshade.ProSHADE_settings_yTranslation_set)
 
 zTranslation = _swig_property(_proshade.ProSHADE_settings_zTranslation_get, _proshade.ProSHADE_settings_zTranslation_set)
 
 overlayDefaults = _swig_property(_proshade.ProSHADE_settings_overlayDefaults_get, _proshade.ProSHADE_settings_overlayDefaults_set)
 
 axisOrder = _swig_property(_proshade.ProSHADE_settings_axisOrder_get, _proshade.ProSHADE_settings_axisOrder_set)
 
 verbose = _swig_property(_proshade.ProSHADE_settings_verbose_get, _proshade.ProSHADE_settings_verbose_set)
 

Detailed Description

Definition at line 400 of file proshade.py.


The documentation for this class was generated from the following file: